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hsa-miR-197在子宫肌瘤中的表达及生物信息学特征分析

徐青,付子毅,吴小莉,皇甫玉爽,凌静

《中国工程科学》 2014年第16卷第5期页码 99-104

摘要：

应用实时定量聚合酶链式反应（PCR）技术检测子宫肌瘤组织中的hsa-miR-197 表达水平，并与配对正常子宫肌细胞对比。通过miRbase、UCSC、NCBI等在线数据库获取并分析hsa-miR-197 序列保守性及其基因组特征。选择miRanda、MirTarget2 及TargetScan 三个在线数据库预测hsa-miR-197 的靶基因并取交集以便后续分析。通过基因本体（GO）功能注释、GO富集分析和信号转导通路富集分析初步阐明，hsamiR-197 靶基因参与调控的细胞功能与信号通路。hsa-miR-197 的功能较广泛，参与肿瘤发生的多种生物学过程，提示hsa-miR-197 可能与子宫肌瘤的发病机制密切相关。

关键词：子宫肌瘤 hsa-miR-197 生物信息学靶基因

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iTRAQ-based quantitative proteomic analysis on differentially expressed proteins of rat mandibular condylar

null

《医学前沿（英文）》 2017年第11卷第1期页码 97-109 doi: 10.1007/s11684-016-0496-1

摘要：

As muscle activity during growth is considerably important for mandible quality and morphology, reducing dietary loading directly influences the development and metabolic activity of mandibular condylar cartilage (MCC). However, an overall investigation of changes in the protein composition of MCC has not been fully described in literature. To study the protein expression and putative signaling in vivo, we evaluated the structural changes of MCC and differentially expressed proteins induced by reducing functional loading in rat MCC at developmental stages. Isobaric tag for relative and absolute quantitation-based 2D nano-high performance liquid chromatography (HPLC) and matrix-assisted laser desorption/ionization time-of-flight/ time-of-flight (MALDI-TOF/TOF) technologies were used. Global protein profiling, KEGG and PANTHER pathways, and functional categories were analyzed. Consequently, histological and tartrate-resistant acid phosphatase staining indicated the altered histological structure of condylar cartilage and increased bone remodeling activity in hard-diet group. A total of 805 differentially expressed proteins were then identified. GO analysis revealed a significant number of proteins involved in the metabolic process, cellular process, biological regulation, localization, developmental process, and response to stimulus. KEGG pathway analysis also suggested that these proteins participated in various signaling pathways, including calcium signaling pathway, gap junction, ErbB signaling pathway, and mitogen-activated protein kinase signaling pathway. Collagen types I and II were further validated by immunohistochemical staining and Western blot analysis. Taken together, the present study provides an insight into the molecular mechanism of regulating condylar growth and remodeling induced by reducing dietary loading at the protein level.

关键词： condylar cartilage mechanical loading proteomic analysis iTRAQ bioinformatics analysis

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Bioinformatic exploration of MTA1-regulated gene networks in colon cancer

null

《医学前沿（英文）》 2016年第10卷第2期页码 178-182 doi: 10.1007/s11684-016-0442-2

摘要：

Metastasis-associated gene 1 (MTA1) controls a series of biological processes in tumor progression. Tumor progression is a complex process regulated by a gene network. The global cancer gene regulatory network must be analyzed to determine the position of MTA1 in the molecular network and its cooperative genes by further exploring the biological functions of this gene. We used TCGA data sets and GeneCards database to screen MTA1-related genes. GO and KEGG pathway analyses were conducted with DAVID and gene network analysis via STRING and Cytoscape. Results showed that in the development of colon cancer, MTA1 is linked to certain signal pathways, such as Wnt/Notch/nucleotide excision repair pathways. The findings also suggested that MTA1 demonstrates the closest relationship in a coregulation process with the key molecules AKT1, EP300, CREBBP, SMARCA4, RHOA, and CAD. These results lead MTA1 exploration to an in-depth investigation in different directions, such as Wnt, Notch, and DNA repair.

关键词： metastasis-associated gene 1 colon cancer bioinformatics

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15th International Congress for Stereology and Image Analysis 第十五届国际体视学与图像分析学术会议

会议日期： 2019年05月27日

会议地点：丹麦/奥胡斯

主办单位：国际体视学与图像分析学会(ISSIA)

黄幼麟：Dynamic Consumer Preferences for Electric Vehicles — A Longitudinal Analysis（2020年7月12日）

2022年06月10日

关键词：能源

福田敏男：Bio Cell Analysis and Assembly by Micro and Nano Robotic Technology（2019年8月25日）

福田敏男(院士)

2021年01月20日

关键词：采油工程

Decomposition analysis applied to energy and emissions: A literature review

《工程管理前沿（英文）》页码 625-639 doi: 10.1007/s42524-023-0270-4

摘要： Decomposition analysis has been widely used to assess the determinants of energy and CO₂ emissions in academic research and policy studies. Both the methodology and application of decomposition analysis have been largely improved in the past decades. After more than 50 years’ developments, decomposition studies have become increasingly sophisticated and diversified, and tend to converge internally and integrate with other analytical approaches externally. A good understanding of the literature and state of the art is critical to identify knowledge gaps and formulate future research agenda. To this end, this study presents a literature survey for decomposition analysis applied to energy and emission issues, with a focus on the period of 2016–2021. A review for three individual decomposition techniques is first conducted, followed by a synthesis of emerging trends and features for the decomposition analysis literature as a whole. The findings are expected to direct future research in decomposition analysis.

关键词： index decomposition analysis structural decomposition analysis production decomposition analysis energy CO₂ emissions

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Flow, thermal, and vibration analysis using three dimensional finite element analysis for a flux reversal

B. VIDHYA,K. N. SRINIVAS

《能源前沿（英文）》 2016年第10卷第4期页码 424-440 doi: 10.1007/s11708-016-0423-9

摘要： This paper presents the simulation of major mechanical properties of a flux reversal generator (FRG) viz., computational fluid dynamic (CFD), thermal, and vibration. A three-dimensional finite element analysis (FEA) based CFD technique for finding the spread of pressure and air velocity in air regions of the FRG is described. The results of CFD are mainly obtained to fine tune the thermal analysis. Thus, in this focus, a flow analysis assisted thermal analysis is presented to predict the steady state temperature distribution inside FRG. The heat transfer coefficient of all the heat producing inner walls of the machine are evaluated from CFD analysis, which forms the main factor for the prediction of accurate heat distribution. The vibration analysis is illustrated. Major vibration sources such as mechanical, magnetic and applied loads are covered elaborately which consists of a 3D modal analysis to find the natural frequency of FRG, a 3D static stress analysis to predict the deformation of the stator, rotor and shaft for different speeds, and an unbalanced rotor harmonic analysis to find eccentricity of rotor to make sure that the vibration of the rotor is within the acceptable limits. Harmonic analysis such as sine sweep analysis to identify the range of speeds causing high vibrations and steady state vibration at a mode frequency of 1500 Hz is presented. The vibration analysis investigates the vibration of the FRG as a whole, which forms the contribution of this paper in the FRG literature.

关键词： flux reversal generator air velocity computation fluid dynamics thermal analysis vibration analysis finite element analysis

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Review of sentiment analysis: An emotional product development view

《工程管理前沿（英文）》页码 592-609 doi: 10.1007/s42524-022-0227-z

摘要： Conveying consumers’ specific emotions in new products, referred to as emotional product development or emotional design, is strategically crucial for manufacturers. Given that sentiment analysis (SA) can extract and analyze people’s opinions, sentiments, attitudes, and perceptions regarding different products/services, SA-based emotional design may provide manufacturers with real-time, direct, and rapid decision support. Despite its considerable advancements and numerous survey and review articles, SA is seldom considered in emotional design. This study is among the first efforts to conduct a thorough review of SA from the view of emotional design. The comprehensive review of aspect-level SA reveals the following: 1) All studies focus on extracting product features by mixing technical product features and consumers’ emotional perceptions. Consequently, such studies cannot capture the relationships between technical and emotional attributes and thus cannot convey specific emotions to the new products. 2) Most studies use the English language in SA, but other languages have recently received more interest in SA. Furthermore, after conceptualizing emotion as Kansei and introducing emotional product development and Kansei Engineering, a review of the data-driven emotional design is then conducted. A few efforts start to study emotional design with the help of SA. However, these studies only focus on either analyzing consumers’ preferences on product features or extracting emotional opinions from online reviews, thus cannot realize data-driven emotional product development. Finally, some research opportunities are provided. This study opens a broad door to aspect-level SA and its integration with emotional product development.

关键词： sentiment analysis emotion product development Kansei Engineering

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Jack up reliability analysis: An overview

Ahmad IDRIS, Indra Sati Hamonangan HARAHAP, Montasir Osman Ahmed ALI

《结构与土木工程前沿（英文）》 2018年第12卷第4期页码 504-514 doi: 10.1007/s11709-017-0443-5

摘要： Jack up is a mobile unit used for oil and gas exploration and production in offshore fields. On demand, the unit is moved and installed in a given location and used for a period up to 12 months before being un-installed and moved to another location. Due to its mobility and re-usability, when the unit is offered for use in a given offshore location, its suitability in terms of safe operation is evaluated in accordance with the guidelines of Site Specific Assessment (SSA) of jack up. When the unit failed safety assessment criteria, the guideline recommended that it is re-assessed by increasing the complexity of the assumptions and methods used. Reliability analysis theories are one of the frameworks recommended for the safety assessment of the units. With recent developments in uncertainty and reliability analysis of structures subject to stochastic excitation, this study aims at providing a review on the past developments in jack up reliability analysis and to identify possible future directions. The results from literature reviewed shows that failure probabilities vary significantly with analysis method used. In addition, from the variants of reliability analysis approach, the method of time dependent reliability for dynamic structures subject to stochastic excitation have not been implemented on jack ups. Consequently, suggestions were made on the areas that need further examination for improvement of the efficiency in safety assessment of the units using reliability theories.

关键词： jack up reliability analysis uncertainty analysis review of jack up

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Systems biomedical analysis of Schistosoma japonicum

Ze-Guang HAN MD,

《医学前沿（英文）》 2010年第4卷第2期页码 157-165 doi: 10.1007/s11684-010-0034-5

摘要： Human schistosomiasis, caused mainly by three principal species including , , and , remains a major public health concern worldwide. is prevalent in southern China, being a major disease risk for 66 million people. The blood fluke has a complex life cycle for survival: as a free-living form in fresh water and as a parasite in the snail intermediate and vertebrate definitive hosts. Systems-based biomedical analyses, including genomic, transcriptomic, proteomic and metabonomic approaches, have been performed on the schistosome. These comprehensive investigations have not only characterized the genomic features but also chartered gene and protein expression profiles across genders and developmental stages. The integration of the huge information will lay a global and solid foundation for the molecular architecture of the biology, pathogenesis, and host-parasite interactions of the human blood fluke, which will facilitate the development of a new antischistosomal vaccine and drugs as well as diagnostic markers for the treatment and control of schistosomiasis.

关键词： Schistosoma japonicum systems biomedical analysis

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Numerical analysis and experimental investigation of modal properties for the gearbox in wind turbine

Pengxing YI,Peng HUANG,Tielin SHI

《机械工程前沿（英文）》 2016年第11卷第4期页码 388-402 doi: 10.1007/s11465-016-0404-z

摘要：

Wind turbine gearbox (WTG), which functions as an accelerator, ensures the performance and service life of wind turbine systems. This paper examines the distinctive modal properties of WTGs through finite element (FE) and experimental modal analyses. The study is performed in two parts. First, a whole system model is developed to investigate the first 10 modal frequencies and mode shapes of WTG using flexible multi-body modeling techniques. Given the complex structure and operating conditions of WTG, this study applies spring elements to the model and quantifies how the bearings and gear pair interactions affect the dynamic characteristics of WTGs. Second, the FE modal results are validated through experimental modal analyses of a 1.5 WM WTG using the frequency response function method of single point excitation and multi-point response. The natural frequencies from the FE and experimental modal analyses show favorable agreement and reveal that the characteristic frequency of the studied gearbox avoids its eigen-frequency very well.

关键词： wind turbine gearbox modal analysis finite element analysis modal frequency bearing equivalence

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Isogeometric analysis of coupled thermo-elastodynamic problems under cyclic thermal shock

Asghar AMANI DASHLEJEH

《结构与土木工程前沿（英文）》 2019年第13卷第2期页码 397-405 doi: 10.1007/s11709-018-0473-7

摘要： The isogeometric analysis (IGA) method was extended for the solution of the coupled thermo-elastodynamic equations. The dimensionless formulation was accepted in discretization of the uncoupled and coupled thermoelasticity equations and the Generalized Newmark method was used in the time integration procedure. First, the performance of the proposed method was verified against a two-dimensional benchmark example subjected to constant thermal shock with available exact analytical solutions. Then a two-dimensional half-space benchmark example under thermal shock was solved. Finally, cyclic thermal shock (CTS) loading was applied on the half-space problem. The results dedicated that IGA can be used as a suitable approach in the analysis of the general thermomechanical problems.

关键词： isogeometric analysis coupled thermo-elastodynamic dynamic analysis generalized newmark cyclic thermal shock

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A dimensional analysis on asphalt binder fracture and fatigue cracking

Qian ZHAO, Zhoujing YE

《结构与土木工程前沿（英文）》 2018年第12卷第2期页码 201-206 doi: 10.1007/s11709-017-0402-1

摘要： Fracture and fatigue cracking in asphalt binder are two of most serious problems for pavement engineers. In this paper, we present a new comprehensive approach, which consists both of dimensional analysis using Buckingham Theorem and -integral analysis based on classic fracture mechanics, to evaluate the fracture and fatigue on asphalt binder. It is discovered that the dimensional analysis could provide a new perspective to analyze the asphalt fracture and fatigue cracking mechanism.

关键词： Dimensional analysis asphalt fracture fatigue cracking

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A frequency error estimation for isogeometric analysis of Kirchhoff–Love cylindrical shells

《结构与土木工程前沿（英文）》 doi: 10.1007/s11709-023-0006-x

摘要： A frequency error estimation is presented for the isogeometric free vibration analysis of Kirchhoff–Love cylindrical shells using both quadratic and cubic basis functions. By analyzing the discrete isogeometric equations with the aid of harmonic wave assumption, the frequency error measures are rationally derived for the quadratic and cubic formulations for Kirchhoff–Love cylindrical shells. In particular, the governing relationship of the continuum frequency for Kirchhoff–Love cylindrical shells is naturally embedded into the frequency error measures without the need of explicit frequency expressions, which usually are not trivial for the shell problems. In accordance with these theoretical findings, the 2nd and 4th orders of frequency accuracy are attained for the isogeometric schemes using quadratic and cubic basis functions, respectively. Numerical results not only thoroughly verify the theoretical convergence rates of frequency solutions, but also manifest an excellent magnitude match between numerical and theoretical frequency errors for the isogeometric free vibration analysis of Kirchhoff–Love cylindrical shells.

关键词： isogeometric analysis Kirchhoff–Love cylindrical shell free vibration frequency error convergence